PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 25383.3 Da PI: 4.7228 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 4e-19 | 40 | 89 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++aa++kl+g XP_021284156.1 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDAAARKLYG 89 69****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MSTSLMGGFG ERKQIKKPAQ ASSRKGCMRG KGGPENALCT YKGVRQRTWG KWVAEIREPN 60 RGARLWLGTF DTSHEAAMAY DAAARKLYGS DAKLNLPELC VNPQNPPSSA NTPIAPIGNQ 120 PQSVNNSGTS SSNSQIIMAN DVKPVYNNDS VMSFPNENIG SQGNLAENNA KFGQNEDGID 180 GFWENMSVNL PVLDDTIWTE AAMSLDFPVM DDPGSFAGTV VDATGWDALQ SPWCM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 1e-55 | ERF family protein |