PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021283722.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GATA
Protein Properties Length: 299aa    MW: 32038.3 Da    PI: 6.0313
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021283722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.51.3e-16210246135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp+g+++LCnaCGl+++ kg+
  XP_021283722.1 210 CTHCGISSksTPMMRRGPSGPRSLCNACGLFWANKGT 246
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MYGQSQPMNI PAQIVGSGAD VDDDVSASAS ADNHHSVSYD AHPLEDGVGV EDVANDPIYV  60
SAAVASASDL AAVQRVDGAS QLTLSFRGQV YVFDAITPDK FHAVLLLLGG CELASGPHGV  120
EMSSQNQRGV LDFPSRSTQP HRAASLDRFR QKRKERCFDK KVRYSVRQEV ALRMQRNKGQ  180
FTSSKKSDGA YSWGTSQDSG QDDNLPDTSC THCGISSKST PMMRRGPSGP RSLCNACGLF  240
WANKGTLRDI PKKTQDHSLT PVEQGESEAN DSDCGTAIPT QSNVVSFSNG DASALIAEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.26e-94GATA family protein