PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HSF | ||||||||
Protein Properties | Length: 447aa MW: 49529.1 Da PI: 5.0836 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 114.9 | 5.2e-36 | 25 | 116 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sws+ +nsfvv++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_021283526.1 25 FLSKTYDMVDDPSTNSVVSWSSGNNSFVVWKVPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKT 110 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_021283526.1 111 ISRRKP 116 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence |
MDSLHDSISA ANAAAATNGN TVPPFLSKTY DMVDDPSTNS VVSWSSGNNS FVVWKVPEFA 60 RDLLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF LRGQKHLLKT ISRRKPANVH 120 NNQQPQVQSS SVGACVEVGK FGLEEEVERL KRDKNVLMQE LVRLRQQQQT TDNQLQAVGQ 180 RVQVMEQRQQ QMMSFLAKAM QSPGFLSQLV QQQNESNRRL TGGNKKRRLP RQDEENLTGE 240 HGAISPNGQI VKFQPSLNEA AKAMLHQILK MNTSSRLESS MNCPGAFMID GVPPSNALDS 300 GSSSSRISGV TLSEVPPASG QSYLQAESDA SLAGSERGNA EYVDQMSAGL NGGMPVQTDD 360 FSTDQDMDIL LEGTPKLPAI NDVFWEQFLT TSPLTEDTDE ITSSSLENGA NTEQESLLVQ 420 ENGWDKIPHM NHLTEQMGLL TSDSRRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16820.2 | 1e-121 | HSF family protein |