PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283424.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HB-other | ||||||||
Protein Properties | Length: 161aa MW: 18427 Da PI: 8.5031 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.9 | 1.2e-20 | 28 | 79 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++t++q+++Le++F+++ +p++++r+eL+k+lgL+ +q+k+WFqN+R++ k XP_021283424.1 28 HRHTTHQIQTLEAFFKSCAHPDENQRRELSKELGLEPKQIKFWFQNKRTQTK 79 679*********************************************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MDIASGNIGS SDDEQKASTC HEKGRIYHRH TTHQIQTLEA FFKSCAHPDE NQRRELSKEL 60 GLEPKQIKFW FQNKRTQTKA RKERAENSIL RASKESLLYE NLAMREALAK TVCVCCGSPL 120 LPEPQAGHGL HQLALENTQV KQELEKLTKL LANYINMHVH H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.4 | 3e-42 | HD-ZIP family protein |