PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | FAR1 | ||||||||
Protein Properties | Length: 291aa MW: 33030.2 Da PI: 7.6882 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 90 | 3.3e-28 | 128 | 215 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++Y+ ++GF +r++++++sk +g+i++r +vC+keg+r++ +++ +k+ r+ra tr+gCka++ ++k+++gkw++tk+++eH+H+la XP_021283400.1 128 FYSAYGMRMGFITRMNYHNRSKIDGSIVSRALVCNKEGYRKPYRRD-VKNVRSRAPTRVGCKAMISIRKMSTGKWVITKFVKEHTHPLA 215 9******************************************999.****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MIFRSSAVKT IKFMETELDN GVQLEQTDVT RGEVLDDLTD KEHQLGNDVQ LEQTDNDIRG 60 EVLDNATNFE HHLGNDGTKA GSSVPYGSQV EENDKITLNS SGVQLTVVEG DEPYVGQEFE 120 NEAAAHAFYS AYGMRMGFIT RMNYHNRSKI DGSIVSRALV CNKEGYRKPY RRDVKNVRSR 180 APTRVGCKAM ISIRKMSTGK WVITKFVKEH THPLAGCQAQ KALISNQIPN EDKRVQELTQ 240 QLLIERKRSA SLRRFIDLLF NHIEEHTQGL SKRIQYIVDS VNKIESEGKN R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 6e-75 | FAR1 family protein |