PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021283396.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 291aa    MW: 33030.2 Da    PI: 7.6882
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021283396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1903.3e-28128215290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++Y+ ++GF +r++++++sk +g+i++r +vC+keg+r++ +++ +k+ r+ra tr+gCka++ ++k+++gkw++tk+++eH+H+la
  XP_021283396.1 128 FYSAYGMRMGFITRMNYHNRSKIDGSIVSRALVCNKEGYRKPYRRD-VKNVRSRAPTRVGCKAMISIRKMSTGKWVITKFVKEHTHPLA 215
                     9******************************************999.****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MIFRSSAVKT IKFMETELDN GVQLEQTDVT RGEVLDDLTD KEHQLGNDVQ LEQTDNDIRG  60
EVLDNATNFE HHLGNDGTKA GSSVPYGSQV EENDKITLNS SGVQLTVVEG DEPYVGQEFE  120
NEAAAHAFYS AYGMRMGFIT RMNYHNRSKI DGSIVSRALV CNKEGYRKPY RRDVKNVRSR  180
APTRVGCKAM ISIRKMSTGK WVITKFVKEH THPLAGCQAQ KALISNQIPN EDKRVQELTQ  240
QLLIERKRSA SLRRFIDLLF NHIEEHTQGL SKRIQYIVDS VNKIESEGKN R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.26e-75FAR1 family protein