PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021283365.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family G2-like
Protein Properties Length: 292aa    MW: 32691.1 Da    PI: 9.1169
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021283365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.81.4e-29158212155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r++Wt +LHe+Fv++v+ LGG+ekAtP++il+lmk +gLt+ hvkSHLQkYR 
  XP_021283365.1 158 KTRIKWTVDLHEKFVNCVNLLGGAEKATPRAILKLMKSNGLTVLHVKSHLQKYRY 212
                     68****************************************************6 PP
2Myb_DNA-binding45.81.4e-14162211348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      +WT +++e++v++v++lGg    t+++I + m  +g+t  ++ks++qky+
   XP_021283365.1 162 KWTVDLHEKFVNCVNLLGGAekaTPRAILKLMKsNGLTVLHVKSHLQKYR 211
                      8*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MDGAASQQKQ ERLVSHSVTT STTPLEQLAS AFCATDQSKS YIDFQPAKRD IDEHQAPGYE  60
AIPTINQAKD TLLSIVNPHL WRNQCQRFTE KSNGKSYWSQ QGSLLSLDHG KLLAEATRDS  120
KVISLCSPQP EQQYPNISRI SGTRVSSVSS GGRPSSIKTR IKWTVDLHEK FVNCVNLLGG  180
AEKATPRAIL KLMKSNGLTV LHVKSHLQKY RYAKYITGST QAKPDQGVDD DDLPVLYLKS  240
GMQATDILQM QLEVQRHLCE QLEIQQNLQQ AIQEQGKQIQ MMLEQLKKTN KA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.23e-36G2-like family protein