PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 226aa MW: 26001.4 Da PI: 9.4874 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.5e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++v ++G g+W++++ g+ R +k+c++rw +yl XP_021283332.1 15 KGLWSPEEDLKLRNYVLKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.7 | 5.5e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T++E+e ++ ++++lG++ W+ Ia++++ gRt++++k++w++yl XP_021283332.1 68 RGMFTPQEEETILTLHHMLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 113 789*******************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MGYKPSDKPK AKHRKGLWSP EEDLKLRNYV LKHGHGCWSS VPINAGLQRN GKSCRLRWIN 60 YLRPGLKRGM FTPQEEETIL TLHHMLGNKW SQIAQHLPGR TDNEIKNYWH SYLKKKVAKV 120 EESEAKTRTH YTTSSSENTE SILSPQTVIG QMPSYDSLQH FEKPSIDIDQ SFPQHFDFPK 180 EPQRSSLPKL LFAEWLSLDQ EGGSFANSVK PVTSSDGFNQ VIFMMD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 5e-60 | MYB family protein |