PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021283245.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 283aa    MW: 32076.8 Da    PI: 5.4498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021283245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-202878155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  XP_021283245.1 28 CQYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
                    68*****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MESYRRSPLK PWKKGPTRGK GGPQNASCQY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPD AYLNLPHLQP NSNPPNKLQK FKWIPSKNFI SMFPSCGLLN  120
INAQPSVHVI HQRLQELKKN GVLNQTGSSS SSSCESKTDI QIINDETPAD DPQMKEKDVE  180
ISSEKMTGAY EDKPQIDLHE FLQQLGILRE EKQSEGAETT ESLTATDSSI KDYDEVAVFA  240
ENSFNWDAMI EMHGVADYQG AEASFQVHDT QEELTFPTSI WNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-84ERF family protein