PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283048.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WOX | ||||||||
Protein Properties | Length: 250aa MW: 27398.7 Da PI: 6.5197 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.9 | 1.1e-15 | 22 | 82 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ XP_021283048.1 22 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 82 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 107.5 | 8.1e-35 | 21 | 84 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_021283048.1 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 84 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEDQAPDRNS PSHGSERSEP VRSRWTPKPE QILILESIFN SGMVNPPKDE TVRIRKLLEK 60 FGSVGDANVF YWFQNRRSRS RRRQRQLQAS LAGDHQQRNQ AQVVGGAIQY ENSTAAMGFA 120 NSPSFANSSP SSFLVGSSSS CGVMGDDGFE NLLSMSGQMG FQEVGQSSSV TSVLCPSETP 180 NLHYQSGFIT VFINGVPTEV PRGPLDMKAM FGQDVVLVHS SGVPVPMNEF GFLLQSLQPG 240 ESYFLVSRPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 1e-81 | WOX family protein |