PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282964.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 289aa    MW: 32649 Da    PI: 9.3363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.63.6e-34591991128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....tk..sg 81 
                     lp+G++F+Ptd+el+ e+L+ kv+++       ++++   i+   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+    t+  + 
  XP_021282964.1  59 LPAGVKFDPTDQELL-EHLEGKVRSDArklhplIDEFIPtIEGEnGICYTHPEKLP-GVSKDGLVRHFFHRPSKAYTTGTRKRRKvhtdTEggET 151
                     799************.99******9996665443332333665557**********.555666688******************74555334466 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++v+  +g+++g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  XP_021282964.1 152 RWHKTGKTRPVFI-SGKVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 199
                     7************.999***********6657999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MTWCNDCSDV QTIERSSPPS SHKTVIAERQ KVCLVRTCPS CGHQIKCREQ AGIHDLPGLP  60
AGVKFDPTDQ ELLEHLEGKV RSDARKLHPL IDEFIPTIEG ENGICYTHPE KLPGVSKDGL  120
VRHFFHRPSK AYTTGTRKRR KVHTDTEGGE TRWHKTGKTR PVFISGKVKG YKKILVLYTN  180
YGKQRKPEKT NWVMHQYHLG NNEEEKDGEL VVSKVFYQTQ PRQCGSVKDS LPSKLKVQSG  240
HEGPHHLKNN GLVELYNPSY ISFDQGGQTR GNPSQLLPHF AVHDGSFIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-134NAC family protein