PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282707.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 283aa    MW: 31395.9 Da    PI: 7.409
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-184089255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_021282707.1 40 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 89
                    799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MEIQFQQQQQ QQQHRKSSNI PVSKGGKFKG RDKNNGKVNK FVGVRQRPSG RWVAEIKDTT  60
QKIRMWLGTF ETAEEAARAY DEAACLLRGS NTRTNFITQV SLDSPLASRI RNLLNSKKGA  120
QEQSVLVSAP TTTTSASTST SPSPSPSSST SSSSCNSSRG LSNDNSSPTG MVQDTQLFGD  180
AYKPDMSHCT RGFEFASSQS DFSHTSEPGF DRFLYTQEIM NFPKNVLLPE ETGPELTEFQ  240
RMKVERQISA SLYAMNGVQE YMETVHDSAE ALWDLPPLCS LFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-29ERF family protein