PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021282624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HSF | ||||||||
Protein Properties | Length: 233aa MW: 26790.2 Da PI: 8.3092 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 110.6 | 1.1e-34 | 24 | 115 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y ++ed++ +++isw+++g+ fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++ weF ++ F+kg++ell++ XP_021282624.1 24 FLMKTYMLVEDPTSDDVISWNADGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSR---------WEFCNEMFRKGDRELLCN 109 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_021282624.1 110 IRRRKA 115 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MEPMASDSNK GLLDYVRKST PPPFLMKTYM LVEDPTSDDV ISWNADGTGF VVWQPAEFAR 60 DLLPTLFKHS NFSSFVRQLN TYGFRKVATS RWEFCNEMFR KGDRELLCNI RRRKAWANKQ 120 QTAATIQVSP QESDEDQRSS STSSSSGHNS LVDENKRLKE ENGVLSLELT SMKRKCKELL 180 DLVAKYAQFE KEKEDESPKL FGVRLEIEGE RDRKRRRAEI SESASILLSQ SCK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 213 | 217 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 5e-69 | HSF family protein |