PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282590.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 341aa    MW: 38062 Da    PI: 4.863
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19124174155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_021282590.1 124 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 174
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDHCPVPTIK YTEHRNQTKL LTPLLNVSLQ NQPEMKPRIV RISVTDADAT DSSSDEEEEQ  60
TTRFRSRNRV KKFVNEITIE SSSPTQTDAV WRSKSSSLSK SSRKRPAAVA EAKVKAPAKV  120
PAGKKFRGVR QRPWGKWAAE IRDPLRRVRL WLGTYDTAEE AAMVYDNAAI QLRGPDALTN  180
FTTPPQKLVQ DNNSQKPLSS SDYNSGEESH NINLCSPTSV LRCPSLSTDE VDSQNVKESR  240
EIGSEPRDAL DESCCISGEN FSDFSDYSSL FPNDIFSSVP DLFADNTSFH EAFLKDDFGN  300
GFLSSGADFE FGFGSFSNWQ HVDDHFQDIG DLFATDSLLA I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.17e-59ERF family protein