PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282568.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 640aa    MW: 68214.5 Da    PI: 5.1801
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.92.8e-16381427455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  ErrRRdriN+++  L+el+P++      K++Ka++L +A+eY+k Lq
  XP_021282568.1 381 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 427
                     6*************************8.....6******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
MGKFGTIDSV LSEIPMSVPS AEMSLNQDDE VVPWLNYPVD QSLHNEYSDF LPELSGVTVN  60
ETSTHSNFAS FDRRSQSIRD SCTVSLNNGE VFEQGNPSKV PTPADEEARP TSGASQLSTL  120
PSQLCQTSSP FVRSRILENF GHSLGHTSTH HAICGDSIEV QASDGGLPGI KMQKQDQAAP  180
CNNTVLMNFS HFSRPAALVK ASLQNISAIA SIERIGSKEK GSAASISDRA DTTLIDSSID  240
LQKEKFSQCQ PTMVLMKTDR KESEAKSLDE PVTAEPIDAI CEENAPKNVK NPSQVIGESA  300
SKGLPDGDKT VEPVLAASSV CSGNSVERAS DDPVYNLKRK NRDNDESECP SEDAEEESVG  360
VKKAVPARGG SGSKRSRAAE VHNLSERRRR DRINEKMRAL QELIPNCNKV DKASMLDEAI  420
EYLKTLQLQV QIMSMGAGLY MPPMMLPTGM QHMHAAHMAH FSPMGVGLGM GMGFGMPLPD  480
MNAGSSARPM VQVPPIHGAP FSGPGPTTLQ GMAGSNLQLF GLPGQGLPMS MPHTPLIPIS  540
SGHLMKSAIG LSACGLVGPM DNMGSATASI SKDPVQNINS QVAQNANVNS SMNQTPSQCP  600
TTNQSFEQPA AVQENGQASE ITGSVPFRSA SGNEKVPDRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1386391ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-61bHLH family protein