PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021282568.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 640aa MW: 68214.5 Da PI: 5.1801 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.9 | 2.8e-16 | 381 | 427 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_021282568.1 381 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 427 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 640 aa Download sequence |
MGKFGTIDSV LSEIPMSVPS AEMSLNQDDE VVPWLNYPVD QSLHNEYSDF LPELSGVTVN 60 ETSTHSNFAS FDRRSQSIRD SCTVSLNNGE VFEQGNPSKV PTPADEEARP TSGASQLSTL 120 PSQLCQTSSP FVRSRILENF GHSLGHTSTH HAICGDSIEV QASDGGLPGI KMQKQDQAAP 180 CNNTVLMNFS HFSRPAALVK ASLQNISAIA SIERIGSKEK GSAASISDRA DTTLIDSSID 240 LQKEKFSQCQ PTMVLMKTDR KESEAKSLDE PVTAEPIDAI CEENAPKNVK NPSQVIGESA 300 SKGLPDGDKT VEPVLAASSV CSGNSVERAS DDPVYNLKRK NRDNDESECP SEDAEEESVG 360 VKKAVPARGG SGSKRSRAAE VHNLSERRRR DRINEKMRAL QELIPNCNKV DKASMLDEAI 420 EYLKTLQLQV QIMSMGAGLY MPPMMLPTGM QHMHAAHMAH FSPMGVGLGM GMGFGMPLPD 480 MNAGSSARPM VQVPPIHGAP FSGPGPTTLQ GMAGSNLQLF GLPGQGLPMS MPHTPLIPIS 540 SGHLMKSAIG LSACGLVGPM DNMGSATASI SKDPVQNINS QVAQNANVNS SMNQTPSQCP 600 TTNQSFEQPA AVQENGQASE ITGSVPFRSA SGNEKVPDRS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 386 | 391 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G09530.2 | 2e-61 | bHLH family protein |