PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021282529.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 252aa MW: 29021.4 Da PI: 6.5311 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.7 | 1.3e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRrng+lKKA ELS+LCdaev vi+fsstgk+y +ss XP_021282529.1 9 KKIENLNSRQVTFSKRRNGLLKKARELSILCDAEVGVIVFSSTGKVYQWSS 59 68***********************************************96 PP | |||||||
2 | K-box | 56 | 1.8e-19 | 83 | 173 | 11 | 100 |
K-box 11 eakaeslq.qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++++lq +++ Lk+e+ L+ + +l G++L+ L++keLqqLe+qL++++ +++++K+++l eq+++++ +e+++ en++Lrk++ee XP_021282529.1 83 SDEHKNLQpIDVNTLKEEYLRLRASYMRLSGKELDGLTFKELQQLEHQLNEGILSVKEQKEQILQEQLKRSRLQERQATLENETLRKQIEE 173 4455555525899***************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MGRGKIEIKK IENLNSRQVT FSKRRNGLLK KARELSILCD AEVGVIVFSS TGKVYQWSST 60 SMEHILLRYS RGTTEDRSRE HPSDEHKNLQ PIDVNTLKEE YLRLRASYMR LSGKELDGLT 120 FKELQQLEHQ LNEGILSVKE QKEQILQEQL KRSRLQERQA TLENETLRKQ IEELRQNTSS 180 NLLEYNPLQR VPPNSSKAEY DCASEEEDDH TDNNDHSDTS LQLGLPSDVG RKRKVAKIEP 240 VSNETTSQVA SE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 2e-59 | MIKC_MADS family protein |