PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021282291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GATA | ||||||||
Protein Properties | Length: 171aa MW: 18586.5 Da PI: 10.9305 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.7 | 8.8e-20 | 26 | 60 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++ XP_021282291.1 26 CTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 60 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MGVMDLREKK SLSEAVMMSE NNKKFCTDCK TTKTPLWRGG PAGPKSLCNA CGIRYRKKRR 60 AMLGLNKGAE KKKERSQSSH GSSTTTGTTS SASVATTNVG DKKPSRQLNG LSESVKMRLY 120 ALGSEVLLQR SSSSLLSGVV KKQRCQRRRK LGEEEQAAFS LMALSCGSVF A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 5e-17 | GATA family protein |