PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021282250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 18778 Da PI: 5.3384 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.6 | 1.7e-14 | 3 | 52 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+ vAeIr+p + r r +lg+f t eAa a+++ ++kl+g XP_021282250.1 3 TYRGVRQRT-WGKCVAEIREP---N-RgNRLWLGTFNTSLEAALAYDEVARKLYG 52 69****999.**********8...2.359************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MCTYRGVRQR TWGKCVAEIR EPNRGNRLWL GTFNTSLEAA LAYDEVARKL YGPSAKLNLP 60 QPHGFPSITS FPGNLVNSCK ETGMLGSPSV GESSGSSGSS IQSEERLVRR KINTEGFKGS 120 VSLGGDREED FYWLEFSLEN DFLKMNGIEV LIGQEFKGNW DGNEIAGMQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 2e-33 | ERF family protein |