PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021282128.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

CPP

Protein Properties

Length: 697aa MW: 77276.9 Da PI: 6.1785

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021282128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.9	1.3e-15	416	453	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCk+skClk+YC+Cfaag +C e C+C+dC+Nk XP_021282128.1 416 CKRCNCKRSKCLKLYCDCFAAGLYCIEPCSCQDCFNKP 453 89**********************************96 PP
2	TCR	53.7	4e-17	500	539	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeCf+ag+ Cs +C+Ce+CkN+ XP_021282128.1 500 RHKRGCNCKKSSCLKKYCECFQAGVGCSPSCRCEGCKNRF 539 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
MDSPDKTQIT PTPSLSKFED SPVFKYINSL SPIELAKFRQ TDNAFNSLAF LSPSSLFPSP 60 QISCHRESRF SVKRHHFSAA SNSSVLQSSN DLNSNEGASK AIEQSDFYDE QPGCLNSGSS 120 FKGVSSDRLD EQSDLAIELP RTLKYDCGSP DGNLEPCDEI LKNTSEKVTR QEGSPFQHNK 180 DEGEERQQSF ENERDLRKIR RIMWSEESTG CDWVAIVSDV ADLLTMNSSI INENTEGQDR 240 RAADPGTTSF ISTILQFPLD NSNNLESTET GDPNGSCKQS EFREPVTDQT PAILSTCLLD 300 KLVVSDSGLN KDDEGEKCNL YSHQQRSIRR RCLVFEKSPG FGLHLNSLAN TSKDQNPLSK 360 LTPSSMKRGE VPQCNKAVVK ENSPETPATV GGNETDLNSP EKKRTKFEHV EENAACKRCN 420 CKRSKCLKLY CDCFAAGLYC IEPCSCQDCF NKPIHENKVL ETRRQIESRN PLAFAPKVIR 480 ITDSVSDSGG ETNKTPASAR HKRGCNCKKS SCLKKYCECF QAGVGCSPSC RCEGCKNRFG 540 QKGGGDESES DGEDLETCER NASEKNSHDI VINRSEEYPD LSVPSSDLSR LPFAFSGKLS 600 GSFLHSIRLS PQLCTTQELG SSDSSSFRPK FESHLQAIPE DKTPETLKHN LSPVLEATSP 660 NCKRVSLPHR ECSSSNTWRS RKLILRSVPP FPSFCQP

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

MDSPDKTQIT PTPSLSKFED SPVFKYINSL SPIELAKFRQ TDNAFNSLAF LSPSSLFPSP  60
QISCHRESRF SVKRHHFSAA SNSSVLQSSN DLNSNEGASK AIEQSDFYDE QPGCLNSGSS  120
FKGVSSDRLD EQSDLAIELP RTLKYDCGSP DGNLEPCDEI LKNTSEKVTR QEGSPFQHNK  180
DEGEERQQSF ENERDLRKIR RIMWSEESTG CDWVAIVSDV ADLLTMNSSI INENTEGQDR  240
RAADPGTTSF ISTILQFPLD NSNNLESTET GDPNGSCKQS EFREPVTDQT PAILSTCLLD  300
KLVVSDSGLN KDDEGEKCNL YSHQQRSIRR RCLVFEKSPG FGLHLNSLAN TSKDQNPLSK  360
LTPSSMKRGE VPQCNKAVVK ENSPETPATV GGNETDLNSP EKKRTKFEHV EENAACKRCN  420
CKRSKCLKLY CDCFAAGLYC IEPCSCQDCF NKPIHENKVL ETRRQIESRN PLAFAPKVIR  480
ITDSVSDSGG ETNKTPASAR HKRGCNCKKS SCLKKYCECF QAGVGCSPSC RCEGCKNRFG  540
QKGGGDESES DGEDLETCER NASEKNSHDI VINRSEEYPD LSVPSSDLSR LPFAFSGKLS  600
GSFLHSIRLS PQLCTTQELG SSDSSSFRPK FESHLQAIPE DKTPETLKHN LSPVLEATSP  660
NCKRVSLPHR ECSSSNTWRS RKLILRSVPP FPSFCQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-97	CPP family protein