PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021281944.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 234aa MW: 27613.1 Da PI: 8.7972 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 65 | 2.3e-20 | 2 | 161 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikevdiykvePwdLpk...........kvkaeekewyfFskrdkkyatgk..rknr 76 l pG+ F+Ptd e+v++yL + ++++ + ++ d+y+ +P+ L + + ++ +fFs+r+++++ + + r XP_021281944.1 2 LSPGYVFDPTDREIVSYYLPRLIASRGntgflG-NLRYfFNVRDVYSRKPSLLFEsnndgekkllpY--MKGNQRFFFSRRQRTSEMNAdhKIYR 93 579*******************99999666632.333426777**********63356665554322..266799******99887433113333 PP NAM 77 a........tksgyWkatgkdkevlsk...kgelvglkktLvfy.....kgrapkgektdWvmheyrl 128 +g Wk t +++++++ k++ g + L f+ ++++++ kt+W+m ey l XP_021281944.1 94 RtlqeegqgEPQGHWKRTSSTHPIFDDqndKKKILGYVNLLSFHeyqigEKNKKEDIKTNWIMYEYYL 161 235555544459*************98766666799*******97777657788889*********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MLSPGYVFDP TDREIVSYYL PRLIASRGNT GFLGNLRYFF NVRDVYSRKP SLLFESNNDG 60 EKKLLPYMKG NQRFFFSRRQ RTSEMNADHK IYRRTLQEEG QGEPQGHWKR TSSTHPIFDD 120 QNDKKKILGY VNLLSFHEYQ IGEKNKKEDI KTNWIMYEYY LCQNRFQEWV ICKIKDKNRS 180 EEDECEPSLL RRLFSSKERA VADGSQPVPC QSSNLVKAPR DFDLNELPPD SPSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63790.1 | 8e-09 | NAC family protein |