PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281928.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 490aa MW: 55405.3 Da PI: 7.6233

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.6	8.7e-11	199	234	5	40
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k rr+++NReAAr+sR+RKka++++Le L++ XP_021281928.1 199 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 234 7789***********************985555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MATSRGNMNN SIQLDHHQHN QHHQNHHHHH QNQQQQQQQQ HQHQIQEHHQ HHQNQIPYAM 60 MQSSSSSSIP GNFISKDTGA YDLGELDQAL FLYLDGQDPS TIQEQRHNSG MRPPTLNIFP 120 SQPMHVEPPL ATKTSRGLVS PATSGSKRPS EPSMELANAR NDASGSAPDQ PAKAVKREGN 180 RKGPTSSSEQ EGPKTPDPKT LRRLAQNREA ARKSRLRKKA YVQQLESSRI RLTQLEQELQ 240 RARAQGMFFG GGVLGGEQGL PVGINNTSSD ATVFDIEYAR WLEEHHRLMC ELRAAVQEHL 300 QENELRIFVD NCLAQFDELM NLKSMVAKTD VFHLVSGMWK TPAERCFMWM GGFRPSELIK 360 VIVNQIEPLT EQQIMGICAL QQSTQEAEEA LSQGLEALNQ SLSDIITSDS LSCPPNMTNY 420 MGQMAIAMNK LATLEGFVRQ ADNLRHQTIH RLHQILTTRQ AARCLLAIAE YFHRLRALSS 480 LWLARPRQEQ

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MATSRGNMNN SIQLDHHQHN QHHQNHHHHH QNQQQQQQQQ HQHQIQEHHQ HHQNQIPYAM  60
MQSSSSSSIP GNFISKDTGA YDLGELDQAL FLYLDGQDPS TIQEQRHNSG MRPPTLNIFP  120
SQPMHVEPPL ATKTSRGLVS PATSGSKRPS EPSMELANAR NDASGSAPDQ PAKAVKREGN  180
RKGPTSSSEQ EGPKTPDPKT LRRLAQNREA ARKSRLRKKA YVQQLESSRI RLTQLEQELQ  240
RARAQGMFFG GGVLGGEQGL PVGINNTSSD ATVFDIEYAR WLEEHHRLMC ELRAAVQEHL  300
QENELRIFVD NCLAQFDELM NLKSMVAKTD VFHLVSGMWK TPAERCFMWM GGFRPSELIK  360
VIVNQIEPLT EQQIMGICAL QQSTQEAEEA LSQGLEALNQ SLSDIITSDS LSCPPNMTNY  420
MGQMAIAMNK LATLEGFVRQ ADNLRHQTIH RLHQILTTRQ AARCLLAIAE YFHRLRALSS  480
LWLARPRQEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-176	bZIP family protein