PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281906.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 315aa MW: 36945.1 Da PI: 4.7107

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	47.9	4.2e-15	10	132	33	128
NAM 33 vikevdiykvePwdLpk....kvka....eekewyfFskrdkkya...tgkrknra.............tksgyWkatgkdkevlskkgelvglk 103 vi +diy+++P+ + + + ++++ + F++r++ ++ +gkr++r+ + gyW+++ +k++l+++++++g XP_021281906.1 10 VIGFADIYSTKPSVFFDdnngN--GlpflKSNQRFIFTHRQRISQknaNGKRPRRIleshhydetlgvvDSGGYWRSSTAEKPILDEQQREIGFV 102 5777899999999995323330..144556678999999987544233899999978999999999887669********************* PP NAM 104 ktLvfy.....kgrapkgektdWvmheyrl 128 +tL f k+++++++kt+W+mheyrl XP_021281906.1 103 RTLNFLefkdeKKSRKDATKTRWLMHEYRL 132 *97777656778889*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MSSLGDLQYV IGFADIYSTK PSVFFDDNNG NGLPFLKSNQ RFIFTHRQRI SQKNANGKRP 60 RRILESHHYD ETLGVVDSGG YWRSSTAEKP ILDEQQREIG FVRTLNFLEF KDEKKSRKDA 120 TKTRWLMHEY RLPGDRFQEW VICKIKDTSR SPHDKYSDSI WMKKLFGKLL LPHSDKNHHH 180 QDEYQSQIQP STVFNNENLQ SYEVDQLLDD DLFTEVDQLL EIDDNRIQTQ SSTIFKDGNL 240 SSCEVDQLHE KKISKDDDPF KEVDQLLEIN DDNQIADCPF KEMEQLLRMN DNDPIADVDE 300 ALATMNFYYL SDLLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.3	1e-10	NAC family protein