PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281862.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 289aa MW: 33057.5 Da PI: 4.7051

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.4	6.3e-45	41	168	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lp G+rF P+deel+ +yLkkkv++++l+ + i+ev++y+ +P++L +++k +e+ewyfF++r+kky++g+r+nrat +gyWk tg+dk++ XP_021281862.1 41 LPYGYRFCPSDEELIEHYLKKKVNNETLPR-NRISEVNLYSKDPSELAAEFKPlTETEWYFFTPRQKKYPNGSRPNRATPKGYWKPTGTDKAIPP 134 699***********************99.77**********9655543788********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g kktL fy+g++p g+ktdW mhey++ XP_021281862.1 135 DSRHPIGYKKTLDFYEGKHPGGRKTDWKMHEYKV 168 999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MEQFHEQNNM QLSAAANGID VDPTCSGSDE TDLLEEYFNS LPYGYRFCPS DEELIEHYLK 60 KKVNNETLPR NRISEVNLYS KDPSELAAEF KPLTETEWYF FTPRQKKYPN GSRPNRATPK 120 GYWKPTGTDK AIPPDSRHPI GYKKTLDFYE GKHPGGRKTD WKMHEYKVKD NTSQNNGRAK 180 NDMKLDDWVL CKLYNKKEKN GEDAANSAPQ ANVIVSQNEA SVMPETNNEL EDIASQPNPI 240 YGSLQHEDES SYGMYLMLSD PTAPILDNDI SYYRIDDRFP DVFDGPGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	3e-53	NAC family protein