PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021281743.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 360aa MW: 39749 Da PI: 9.0829 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.7e-13 | 309 | 354 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq XP_021281743.1 309 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 354 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MDSSTHQSYQ NQNNQPNSGL LRFRSAPSSL LANFTNNLDC GVNKGSFESD RLISRFMNSS 60 GGNSEIEDKS GTEVGVHYAN SQQSYSGLPP HYPRQSSATS SSAMDSSYEL LGMDHHSQGK 120 PIASSLMRQS SSPPGLFTNL SVQNGYASMK GLGNYCGVNG TNGELSSSSN RLKNQISFSS 180 RLPSSLGILS QISEIGNESI RTDGPDDGKL GNSNSDARFY GTGYQYGSWN DSAHLTKNFS 240 GLKRAQDNDR KFFSTNQNDL GNCVHVLSHH LSLPKTSNEM VAMEKFLHFQ DSVPCKIRAK 300 RGCATHPRSI AERVRRTRIS ERMRKLQELV PNMDKQTNTA DMLDLAVEYI KDLQKQFKMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 1e-104 | bHLH family protein |