PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021281731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | AP2 | ||||||||
Protein Properties | Length: 420aa MW: 46485.8 Da PI: 8.6051 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.8e-17 | 64 | 123 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_021281731.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 123 57*******************766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence |
MASTSSSDPG MKAEASGGEN SETAIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK 120 YWGPGTLINF PVTDYTRDLE EMQNVSREDY LASLRRKSSG FSRGISKYRG LSSRWDSSFG 180 RVSGSEYFSS IHYSDDAATE SDYIGGFCIE RKIDLTGYIK WWGTNKTCQA EPGAKSSEEA 240 KHACPEDIGS ELKTSEWAVQ PTEPYQMPRL GTSLEGTKRK GSSVSALSIL SRSADFKSLQ 300 EKALKKQENS ADKDENENKK TINKMDHGKA AEKSVHHDTG SDSLGATLGM STGLSLQKNV 360 FPLTPFLSAP LLTNYNTMDS LVDPGLWTSL VPVLPSGPSR NPEVSKTETS STYTFFRPEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-170 | AP2 family protein |