PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281612.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 415aa MW: 44987.5 Da PI: 5.0231

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.4	4.7e-16	210	266	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v eL eN +L k+l +++++ + XP_021281612.1 210 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVGELRVENASLMKRLADISQKYNEA 266 68*********************************************9999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MDRVFSVEEI SDHFWSSSSA VSTADDDKKP GSQMNRSASE WAFQQFLSEE ADRKGEDEEG 60 EEEEEAKEEL KEKKENGVMT SFNGCLENKD KNNIPVDSEE YQAFLKTKLN LACAAVAMSR 120 ASFVKSQDSA ARADSGSQAS NTPQLGSKAT SKGADNKDGN APVEIPSLPN GQKKSVAQVR 180 PSTSGSSREL SEEDEAEGEN ETMENMDPAD VKRVRRMLSN RESARRSRRR KQAHLTELET 240 QVGELRVENA SLMKRLADIS QKYNEAAVDN RVLKADVETL RAKVKMAEET VKRITGLNPL 300 FHGSSEISTM AMSSFGGSPS DTSTDAAVPV QDGAKHPLYQ ASANNPISTH DLKVSNALAD 360 ISSVENIQPN SAGSTVMGSK IGRTASLQRV ASLEHLQKRI RGGGSPCGPQ SNGEQ

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MDRVFSVEEI SDHFWSSSSA VSTADDDKKP GSQMNRSASE WAFQQFLSEE ADRKGEDEEG  60
EEEEEAKEEL KEKKENGVMT SFNGCLENKD KNNIPVDSEE YQAFLKTKLN LACAAVAMSR  120
ASFVKSQDSA ARADSGSQAS NTPQLGSKAT SKGADNKDGN APVEIPSLPN GQKKSVAQVR  180
PSTSGSSREL SEEDEAEGEN ETMENMDPAD VKRVRRMLSN RESARRSRRR KQAHLTELET  240
QVGELRVENA SLMKRLADIS QKYNEAAVDN RVLKADVETL RAKVKMAEET VKRITGLNPL  300
FHGSSEISTM AMSSFGGSPS DTSTDAAVPV QDGAKHPLYQ ASANNPISTH DLKVSNALAD  360
ISSVENIQPN SAGSTVMGSK IGRTASLQRV ASLEHLQKRI RGGGSPCGPQ SNGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	232	RRSRRRKQ
2	227	232	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	3e-82	bZIP family protein