PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281610.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 359aa    MW: 39672.1 Da    PI: 5.0614
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-08203250455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  XP_021281610.1 203 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 250
                     8*************************9....888999999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MEPEAGTTET RSNGTTSDGD EAVALESLQF TDEIHRLISA PSTDNASSFT ALLELPAPQA  60
VELLHSPESA TLIAAPAPNV EDIKDSFHFP SNTGLIERAA RFSVFAGDSI NNNNKTGSPE  120
TTSNNSSANP QKEVKSEPAE TESSQPLVSD PTVEKRSMKR KDREKKVKGS TKKSKTAANE  180
SSEDAEKLPY VHVRARRGQA TDSHSLAERA RREKINARMK LLQELVPGCN KISGTALVLD  240
EIINHVQSLQ RQVEFLSMRL AAVNPRIDFN LDSIFTAESG SLMDGNFPSM VMPLMWPEVQ  300
VNGNRQQYQQ QWHFDAIQQP IWGREEMCNN YITPENSLLS YDSSTNSATL HSNQVKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-109bHLH family protein