PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281362.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 283aa    MW: 30947.1 Da    PI: 8.6827
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-203181256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  XP_021281362.1 31 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 81
                    589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAGSETAKAT TTVITTTANT MAQPTKPMVR RFVGVRQRPS GRWVAEIKDS SQRVRLWLGT  60
YDTPEEAARA YDEAARALRG ENARTNFASV NHNSSQSGSS PSNGGFVSQS DERHGLSFSS  120
LKAKLSKNLQ SIMARTTENK STKCRVSDHF TFASIFHFRN YQYQNPPVDM KNIEKVVQPS  180
IIVPPAADEP PSSNWDSSSV SDCSNEWVGF RQHGFDSDGS DIGEVSFGDQ GFADQMRGWM  240
DSPEISPRII SAADGGSRSK RLKVSSSVVV PPTFSGSTYN TDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-16ERF family protein