PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021281158.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33634.1 Da PI: 5.0925 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.6 | 1.7e-19 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l+ +v+ +G g+W+++ar g++Rt+k+c++rw++yl XP_021281158.1 23 KGPWTEEEDSMLKAYVNIHGEGRWNSVARLSGLKRTGKSCRLRWLNYL 70 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 5.7e-16 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_021281158.1 76 RGNISLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 78899*****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MDVYERGLIS ETPQSEEEMD VRKGPWTEEE DSMLKAYVNI HGEGRWNSVA RLSGLKRTGK 60 SCRLRWLNYL RPEVRRGNIS LEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKQAKQLKC DVNSKQFRDA MRYVWIPRLI ERIRATSESP SGQPSSSSTT TYMNSGSNIT 180 TSQITYANTT GSVQVDPSLL PELSGTSSDS LDTQVSSVSD LTDCYNPQSA SNNPNNLQNG 240 SGLCAENLAG AWRRDGGIDF QATEEQSNGW LGGGDSLESV WNEENIWFLQ QQLHDEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 8e-83 | MYB family protein |