PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280918.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 210aa    MW: 23137.4 Da    PI: 9.8633
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.5e-21112162255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp++ng   r++lg++ t+e+Aa a+++a+ k++g
  XP_021280918.1 112 HYRGVRRRP-WGKYAAEIRDPKKNG--SRVWLGTYETPEDAALAYDQAAFKMRG 162
                     7********.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MWEIIILSKK INSMESDLAL LESIRQHLLA DDFEASMGLT GSFQGSTPAY LPGASFTSLL  60
LGENWSATAT PSSEPLGLTN AVKAEPAGDV LMEKATVHVA GPEPYAPPKM EHYRGVRRRP  120
WGKYAAEIRD PKKNGSRVWL GTYETPEDAA LAYDQAAFKM RGSKAKLNFP HLIGYGNLKL  180
VEPIRASPKR RSPEQPSTTS LSNDTPKRRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189210KRRSPEQPSTTSLSNDTPKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-45ERF family protein