PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 25860.9 Da PI: 5.4188 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 95 | 146 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g ++AeIrdp++ng +r++lg++ +e+Aa a+++a+ k++g+ XP_021280868.1 95 HYRGVRRRP-WGTYAAEIRDPKKNG--ARIWLGTYERPEDAALAYDRAAFKMRGA 146 6********.***********9998..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MYGGSTSGFD LNLLESIRQY LLEDELPFDD QIDGSKTDAI NVDQWVTFDQ LFDAAETAAV 60 GVSVPSCEVI TSEVGTATAT TATAPKLQAP LKKVHYRGVR RRPWGTYAAE IRDPKKNGAR 120 IWLGTYERPE DAALAYDRAA FKMRGAKAKL NFPHLIGSDQ VEPVRVTNTK RRSPDPSSPQ 180 SSAQSASSSS YISDDGTPKS KRRMISVINS AVKTELGSEF ELELTPTDFW QTVFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 4e-42 | ERF family protein |