PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280867.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 266aa MW: 29583 Da PI: 6.0632 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 129 | 180 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++kGVr+++ +g+++AeIrdp+ ng +r++lg++ t+e+Aa a+++a+ k++g+ XP_021280867.1 129 HFKGVRRRP-WGKYAAEIRDPKRNG--ARIWLGTYETPEDAALAYDRAAFKMRGA 180 58*******.**********98776..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MNVEIVSGSE FNILESFQHH LLDDFEEPQA TTTTSNAVLE HSYNRSSSFS GVFLNESWGD 60 LPLKIDDSED MLVYSALRDA ANSGWSPSNE VDNYTPVAIE ELVSTTTREV EKEESKVKPE 120 TSVPPRGMHF KGVRRRPWGK YAAEIRDPKR NGARIWLGTY ETPEDAALAY DRAAFKMRGA 180 KAKLNFPHLI GSNTGEPVRV GPRRRSPESS APMTASALSD CSRKRRKSSA SNSDQVTAKL 240 REGASLAAEV IQMSTPWTLG DQFWII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 3e-67 | ERF family protein |