PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021280843.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 463aa MW: 52684.6 Da PI: 4.8268

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021280843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	129	3.7e-40	44	174	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 G+rFhPtd el+++yLk+k g++ + ++i+ev di+ +ePw+Lp ++++++++ wyfF + + ky++++r +r+t++gyWk tg+ ++v++ XP_021280843.1 44 TGYRFHPTDFELLHYYLKNKNLGRDALV-QAIAEVeDICGLEPWELPghSNIHSGDQVWYFFYRPNYKYRNSTRIKRTTNEGYWKPTGNPRKVMA 137 7**********************877.7799998*******6448888999********************************** PP NAM 95 k.kgelvglkktLvfykg..rapkgektdWvmheyrl 128 + ++++g k+tLvfykg +++ +kt W+mhey+l XP_021280843.1 138 RdLETEIGKKRTLVFYKGrvSDNYKNKTGWIMHEYEL 174 955667******9833455668*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MRNRKEYQII QPITNEERFS NYYCYYLFWV AVGYYLWKKI LSITGYRFHP TDFELLHYYL 60 KNKNLGRDAL VQAIAEVEDI CGLEPWELPG HSNIHSGDQV WYFFYRPNYK YRNSTRIKRT 120 TNEGYWKPTG NPRKVMARDL ETEIGKKRTL VFYKGRVSDN YKNKTGWIMH EYELTATLPN 180 QTTFILCKLK KKYAKAEVPC IEEGQSSHYL PPNLGNYIAH NAIPAEAARC LTDQSDPNEI 240 LARLESFNDH DGLEYQSTEL WDSYLVGDVP KNEGSNLAFN FGNHVAENAI PNDQLKPSDE 300 APIQQEVPQD QSSTNEQDNN FGNLVPTDGI SYQHKFVVEN DGSTMPSTIQ NPIAAQTVQM 360 HLSNLGGAST DDLFAELDPL PEVQGTSIGQ GFDDWISPAD TIGNYLNIPD VSDNQSSTNE 420 EQNPTAANGG CSLPFAGMME SPYPINPSRK RLRTDCEGFG WDK

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MRNRKEYQII QPITNEERFS NYYCYYLFWV AVGYYLWKKI LSITGYRFHP TDFELLHYYL  60
KNKNLGRDAL VQAIAEVEDI CGLEPWELPG HSNIHSGDQV WYFFYRPNYK YRNSTRIKRT  120
TNEGYWKPTG NPRKVMARDL ETEIGKKRTL VFYKGRVSDN YKNKTGWIMH EYELTATLPN  180
QTTFILCKLK KKYAKAEVPC IEEGQSSHYL PPNLGNYIAH NAIPAEAARC LTDQSDPNEI  240
LARLESFNDH DGLEYQSTEL WDSYLVGDVP KNEGSNLAFN FGNHVAENAI PNDQLKPSDE  300
APIQQEVPQD QSSTNEQDNN FGNLVPTDGI SYQHKFVVEN DGSTMPSTIQ NPIAAQTVQM  360
HLSNLGGAST DDLFAELDPL PEVQGTSIGQ GFDDWISPAD TIGNYLNIPD VSDNQSSTNE  420
EQNPTAANGG CSLPFAGMME SPYPINPSRK RLRTDCEGFG WDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03200.1	4e-35	NAC family protein