PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280835.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 149aa    MW: 16762.7 Da    PI: 5.771
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-191666255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+++AeIrd +    + +r +lg+f taeeAa+a+++a+ +++g
  XP_021280835.1 16 RYRGVRRRP-WGKYAAEIRDSTR---HgARLWLGTFETAEEAARAYDRAAFSMRG 66
                    6********.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MEQNRKKVEE GESSVRYRGV RRRPWGKYAA EIRDSTRHGA RLWLGTFETA EEAARAYDRA  60
AFSMRGSSAI LNFPDEHIIS LTTANSAPPP PPPLPCSSSS SATMAASSSS FFENVESKKD  120
HEKQVLELEY LDDKLLEELL DVENKTKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.13e-25ERF family protein