PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280685.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 311aa    MW: 34800.9 Da    PI: 5.7455
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.5e-05188215632
                     HHHHHHHHHHHHHHHHHHHCTSCCC... CS
             HLH   6 nerErrRRdriNsafeeLrellPkas.k 32 
                     +  +r+RR ri +++  L+ellP+++ +
  XP_021280685.1 188 SGSDRQRRLRIAESIRALQELLPNPVeR 215
                     5568********************9532 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDGQQGRENP LMSLNSGGSA SDFSYDYVND PNPHFPMAAG RKNLEKVPTA EVLESIGSPV  60
GGIHALDGIS EIQRELLHNN AGKAFGSQPD DYSLESEHGK LKLSAYTTNS NNCEASASER  120
FLRPHDRLSV SRFSSSEYES HAQQTHTFWM QEPNENDCNV FQLQPKETIS AFSFLSQPHY  180
SVRKSRASGS DRQRRLRIAE SIRALQELLP NPVERGQATA LDDIIDHVKF LQLQMKELSR  240
SRLGGEPTSN PFVFLEGYGH YALHEQMMNE PLEEMMGKLL EINPPAATQL LESRGLFMMP  300
RALVDGLHRV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.16e-20bHLH family protein