PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021280683.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 339aa MW: 38019.4 Da PI: 5.2434 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.8 | 5.1e-05 | 216 | 243 | 6 | 32 |
HHHHHHHHHHHHHHHHHHHCTSCCC... CS HLH 6 nerErrRRdriNsafeeLrellPkas.k 32 + +r+RR ri +++ L+ellP+++ + XP_021280683.1 216 SGSDRQRRLRIAESIRALQELLPNPVeR 243 5568********************9532 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 339 aa Download sequence |
MDGQQGRENP LMSLNSGGSA SDFSYDYVND PNPHFPMAAG RSENQLSPQS LSQWIDCPKT 60 PHSYVEFLTE NLEKVPTAEV LESIGSPVGG IHALDGISEI QRELLHNNAG KAFGSQPDDY 120 SLESEHGKLK LSAYTTNSNN CEASASERFL RPHDRLSVSR FSSSEYESHA QQTHTFWMQE 180 PNENDCNVFQ LQPKETISAF SFLSQPHYSV RKSRASGSDR QRRLRIAESI RALQELLPNP 240 VERGQATALD DIIDHVKFLQ LQMKELSRSR LGGEPTSNPF VFLEGYGHYA LHEQMMNEPL 300 EEMMGKLLEI NPPAATQLLE SRGLFMMPRA LVDGLHRVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G30980.1 | 5e-20 | bHLH family protein |