PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280682.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 339aa    MW: 38019.4 Da    PI: 5.2434
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.85.1e-05216243632
                     HHHHHHHHHHHHHHHHHHHCTSCCC... CS
             HLH   6 nerErrRRdriNsafeeLrellPkas.k 32 
                     +  +r+RR ri +++  L+ellP+++ +
  XP_021280682.1 216 SGSDRQRRLRIAESIRALQELLPNPVeR 243
                     5568********************9532 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDGQQGRENP LMSLNSGGSA SDFSYDYVND PNPHFPMAAG RSENQLSPQS LSQWIDCPKT  60
PHSYVEFLTE NLEKVPTAEV LESIGSPVGG IHALDGISEI QRELLHNNAG KAFGSQPDDY  120
SLESEHGKLK LSAYTTNSNN CEASASERFL RPHDRLSVSR FSSSEYESHA QQTHTFWMQE  180
PNENDCNVFQ LQPKETISAF SFLSQPHYSV RKSRASGSDR QRRLRIAESI RALQELLPNP  240
VERGQATALD DIIDHVKFLQ LQMKELSRSR LGGEPTSNPF VFLEGYGHYA LHEQMMNEPL  300
EEMMGKLLEI NPPAATQLLE SRGLFMMPRA LVDGLHRVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.15e-20bHLH family protein