PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280660.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 312aa    MW: 35777.2 Da    PI: 4.9823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.52e-19118167255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +grW+AeIrdp++   r+r++lg+++ta eAa  +++a+ +++g
  XP_021280660.1 118 KYRGVRQRP-WGRWAAEIRDPTS---RTRVWLGTYDTAXEAALVYDRAAIRIKG 167
                     8********.**********965...4***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MNPASSVRVK YTEQRRVTNK LVKPSSKWFS MESSAKAPRI VRISVTDGDA TDSSSDESEH  60
ERNHRVKRHV NEIRIEDCST FNFSKSANKQ NKQTNSKCNP VNIRSKKQQH QCLSTGVKYR  120
GVRQRPWGRW AAEIRDPTSR TRVWLGTYDT AXEAALVYDR AAIRIKGPDA LTNFVKPPVR  180
PSSPEIELET ISGYDSGQES LSLCSPTSVL RFQSNEETEL QIESKDDSFE LTESERRPVQ  240
ERPEEPTNLS DEYLSTDPGA LCDYFDYDNI GPIFFDEMRL PEERNLEQDY ADISVKLDVD  300
FGSCTWDVDN YY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.12e-55ERF family protein