PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 294aa MW: 32708.7 Da PI: 8.9635 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.8 | 8e-18 | 130 | 184 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_021280430.1 130 RKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 184 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 125.4 | 2.5e-40 | 130 | 219 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ lLEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_021280430.1 130 RKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 219 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MGGEKDDGLG LSLGLGCAQN HPSWKLNRMP LASPRMQNLQ RKNTWNELFQ SSDRNLDTRS 60 FLRGIDVNRA PATVDCEEEG GVSSPNSTIS SISGKRNERD LVGDETEAER ASCSRASDDE 120 DGGAGGDASR KKLRLSKEQS LLLEETFKEH STLNPKQKLA LAKQLNLRPR QVEVWFQNRR 180 ARTKLKQTEV DCEYLKRCCE NLTEENRRLQ KEVQELRALK LSPQLYMHMN PPTTLTMCPS 240 CERVAVSSSS SAAAAASSTP TSTVPNRHHR TSPVSPWAAM PISHRPFHAP ASRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 135 | SRKKLRL |
2 | 179 | 187 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60390.1 | 4e-88 | HD-ZIP family protein |