PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280351.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 310aa    MW: 34449.6 Da    PI: 9.5543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19112162256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r+r++lg++ tae Aa a+++a+ kl+ge
  XP_021280351.1 112 LYRGVRQRH-WGKWVAEIRLPQN---RTRVWLGTYETAEAAAYAYDRAAYKLRGE 162
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MQDNNLPFGF NNGADIGSSL SQIILSGGSN ALDSIFSHCS QSTTTSTAMT TNSVYKPLGS  60
SVYLRQRDLL SKFCQESKGK APIPRNSLTN QLQSYQNPAS SSNYTSLQKK KLYRGVRQRH  120
WGKWVAEIRL PQNRTRVWLG TYETAEAAAY AYDRAAYKLR GEYARLNFPN LKDPSKLGFR  180
DSARLNALKN TVDAKIQAIC QKVKRERANA KKKSNSDRPA AASKAEKEVK VTESCSSSSS  240
LSRAVFSDNL SNELLSPTVS EDGFWRCENS PSSVSNDYPM MMAEEPGFED CSLARMPSFD  300
AELIWEILAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-52ERF family protein