PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280320.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 310aa    MW: 33959.3 Da    PI: 5.106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.5e-18126175255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  XP_021280320.1 126 TYRGVRIRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 175
                     69****888.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MKESYKPPTP ICYMPITQNS SMPTTRTLAV MERDINIEND AHHNNLLSSY SVISTTVTSS  60
STSTSSSTSS SSTAFSVSGS NKSKKTSKNS VAPKGSKRAG DLENDSESNK KRHRSFDDDD  120
GSKHPTYRGV RIRSWGKWVS EIREPRKKSR IWLGTYPTAE MAARAHDVAA LAIKGPSAYL  180
NFPELVKELP RPASTSPKDI QAAASQAAAA TFLETRRCNI EAEAEAEAEV GPSQEELPVS  240
HLSQTSASDN VQESSSSPSI DDDDTLFDLP DLMIDATDRS DGFCSYSSTW QICAVDAGFR  300
LEEPFSWEYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-46ERF family protein