PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021280142.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 262aa MW: 30144.7 Da PI: 6.7921

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021280142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.8e-51	10	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv++yL kk++++++ ++ e+d++++ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ XP_021280142.1 10 LPPGFRFYPSDEELVCHYLYKKIANEEVLK-GTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDP 103 79***********************655.78***********88888999*********************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++e+vg++ktLvfy++rap+g kt W+mhe+rle XP_021280142.1 104 rTQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 138 67778*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANEEVLKG TLVEIDLHTC EPWQLPEVAK 60 LNANEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRTV VDPRTQEVVG MRKTLVFYRN 120 RAPNGIKTGW IMHEFRLETP HMPPKEDWVL CRVFHKSKGE NSSKLSPPMM FETSTHAPSL 180 TDQTMACAYQ QISSLSATPT HPSHGQSLLN LFQFSQEKSN NNPANEVSSK VDDEYEFLWD 240 MNMEENSLGX SWGRFQLGGH EI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	3e-96	NAC family protein