PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280097.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NF-YC | ||||||||
Protein Properties | Length: 155aa MW: 17415 Da PI: 10.0684 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 47.2 | 5e-15 | 23 | 104 | 18 | 98 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 + e+P r+kki+k d+d+++i +ea ++s + +lf+ l+ rs a e+k++t+k + +av+r + dfl+d p XP_021280097.1 23 RPEFPTGRVKKIMKLDKDINKINSEALFIVSCSTDLFLRFLAERSAEVATEKKKKTVKLEHLRTAVKRHRpTSDFLLDSLPM 104 6689**************************************************************9975489*****9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MCFSVPTPNV PSMAEDEAID PIRPEFPTGR VKKIMKLDKD INKINSEALF IVSCSTDLFL 60 RFLAERSAEV ATEKKKKTVK LEHLRTAVKR HRPTSDFLLD SLPMPAESTQ SVARTVTDRE 120 RSRPVADKPA AAGTRRIDHF FRKPGNEAPI QINDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 3e-43 | NF-YC family protein |