PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021279689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21328 Da PI: 8.7331 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.7 | 7e-19 | 106 | 155 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrdp++ g r +lg++ t+e+Aa a+++a+ +++g XP_021279689.1 106 YRGVRRRP-WGKYAAEIRDPKKKG--VRLWLGTYKTPEDAALAYDKAAFEIRG 155 9*******.**********96643..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MWGESTSASA SDHDLAVLDS ISEHLLADDF EASLKSSDFC RTFSFTSLPL NASTQPLKLD 60 SEFSSGCPAL SNPTDSPTAP EKAEVRPLKA SQGEAATAAC GKEVSYRGVR RRPWGKYAAE 120 IRDPKKKGVR LWLGTYKTPE DAALAYDKAA FEIRGSKAKL NFPHLIGSSN STEPVRVCPR 180 RRSPDTTSRK CGGAVFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-45 | ERF family protein |