PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021279677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 342aa MW: 39898.5 Da PI: 4.528 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111.3 | 1.1e-34 | 14 | 136 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +G+rFhP+d+el+++yL +k+ +++ + ++i e+ d++++eP++Lp +++++ wy F++r+ + kr +r+tk g+Wk tg++++++ XP_021279677.1 14 VGYRFHPSDKELIDHYLWNKALDRDSAV-QAIGEItgDLCDYEPERLPgFsVRRSNDQVWYLFCRRHYN----KRVKRTTKLGFWKLTGRHRQIK 103 7************************888.779888889**********643344577799****99764....59*******************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +g+kktLvfy+gr +kg+ t Wv+hey+l XP_021279677.1 104 A--NVGIGTKKTLVFYEGRVSKGKWTPWVIHEYSL 136 9..778***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MSDEMSRCSC NDIVGYRFHP SDKELIDHYL WNKALDRDSA VQAIGEITGD LCDYEPERLP 60 GFSVRRSNDQ VWYLFCRRHY NKRVKRTTKL GFWKLTGRHR QIKANVGIGT KKTLVFYEGR 120 VSKGKWTPWV IHEYSLPDTL PNQKGYFLCK LKRKEDEKAG IPSGEEGQPS NVADDKIFDN 180 SREINIDELL AQLEDTNDSN KVEDEVASAQ KLQMYGDFDE VQNQSNTNEQ DDEFYLVSST 240 QQSQIHEEHV PFYNDFTNFC GSNGNFRKVQ NQSSTNEQDD EFYRVSPTRQ SQICEEYVPS 300 YDNSTNFCSF NDNFHEVQNQ SSTNEQDDEF WKNIFIDNED DA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01550.1 | 5e-43 | NAC family protein |