PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021279672.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 484aa MW: 55164.2 Da PI: 5.2913

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021279672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.2	6e-31	8	104	31	128
NAM 31 eevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123 +++i+evd+++ ePw+Lp+ v+++ +ew fF k +k + +++++r+t++gyWk+tg+d+e+ + +g+l+g+kktLvf+kgr+p+g+ktdWvm XP_021279672.1 8 TRHIREVDLLQREPWELPAlsIVQSRYQEWLFFYKLNKIS--DRKTERTTQAGYWKSTGQDREIRD-GGRLIGTKKTLVFFKGRTPRGVKTDWVM 99 467*************44477778889999998865..5799*****************9.************************ PP NAM 124 heyrl 128 heyr+ XP_021279672.1 100 HEYRA 104 *96 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MIGDNDRTRH IREVDLLQRE PWELPALSIV QSRYQEWLFF YKLNKISDRK TERTTQAGYW 60 KSTGQDREIR DGGRLIGTKK TLVFFKGRTP RGVKTDWVMH EYRATADFVP PNAEKSYVVG 120 FLRNKAAERT ENLTSINGQP SSHLAASSSQ SNSVGVAHME VAPQPQSNSI DYEIALQTQF 180 EDEGIFDYDL YDQSRMEEEG ITLEDLPSND QSWIDQPQSN SMDYDEQTEW QFQFDTIEQE 240 LYFMTSTFPD QDDRSYEETG YPLRPNYGAP DFAGGSSNTD LEQANAWRDQ FVQHMSDGTG 300 CGHSEGFYQK RMETGFHHDE VLIMDSSVDS ATVTAHEINC LESVLEEKSV TRTCKSQYEP 360 RTCKSVVQEH PRRVKLQGKS LGKAVSRDKA RESGVRGPVV ELARNKKSIV QSNKDPKMDR 420 DKNTRSDLNS RSKGSAGSSR KNSFNSVEMS QLSCKTNPPL VYVGNVLLGV ILFIFVVWEV 480 LFLH

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MIGDNDRTRH IREVDLLQRE PWELPALSIV QSRYQEWLFF YKLNKISDRK TERTTQAGYW  60
KSTGQDREIR DGGRLIGTKK TLVFFKGRTP RGVKTDWVMH EYRATADFVP PNAEKSYVVG  120
FLRNKAAERT ENLTSINGQP SSHLAASSSQ SNSVGVAHME VAPQPQSNSI DYEIALQTQF  180
EDEGIFDYDL YDQSRMEEEG ITLEDLPSND QSWIDQPQSN SMDYDEQTEW QFQFDTIEQE  240
LYFMTSTFPD QDDRSYEETG YPLRPNYGAP DFAGGSSNTD LEQANAWRDQ FVQHMSDGTG  300
CGHSEGFYQK RMETGFHHDE VLIMDSSVDS ATVTAHEINC LESVLEEKSV TRTCKSQYEP  360
RTCKSVVQEH PRRVKLQGKS LGKAVSRDKA RESGVRGPVV ELARNKKSIV QSNKDPKMDR  420
DKNTRSDLNS RSKGSAGSSR KNSFNSVEMS QLSCKTNPPL VYVGNVLLGV ILFIFVVWEV  480
LFLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	2e-30	NAC family protein