PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021279671.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 510aa MW: 58201.8 Da PI: 5.2141

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021279671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	128.7	4.5e-40	6	130	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +GfrF P dee+++++L kk+ g++ ++ ++i+evd+++ ePw+Lp+ v+++ +ew fF k +k + +++++r+t++gyWk+tg+d+e+ + XP_021279671.1 6 DVGFRFLPPDEEIISFFLSKKMIGDNDRT-RHIREVDLLQREPWELPAlsIVQSRYQEWLFFYKLNKIS--DRKTERTTQAGYWKSTGQDREIRD 97 58*********************9888.88***********44477778889999998865..5799*****************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l+g+kktLvf+kgr+p+g+ktdWvmheyr+ XP_021279671.1 98 -GGRLIGTKKTLVFFKGRTPRGVKTDWVMHEYRA 130 .*****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MNIVLDVGFR FLPPDEEIIS FFLSKKMIGD NDRTRHIREV DLLQREPWEL PALSIVQSRY 60 QEWLFFYKLN KISDRKTERT TQAGYWKSTG QDREIRDGGR LIGTKKTLVF FKGRTPRGVK 120 TDWVMHEYRA TADFVPPNAE KSYVVGFLRN KAAERTENLT SINGQPSSHL AASSSQSNSV 180 GVAHMEVAPQ PQSNSIDYEI ALQTQFEDEG IFDYDLYDQS RMEEEGITLE DLPSNDQSWI 240 DQPQSNSMDY DEQTEWQFQF DTIEQELYFM TSTFPDQDDR SYEETGYPLR PNYGAPDFAG 300 GSSNTDLEQA NAWRDQFVQH MSDGTGCGHS EGFYQKRMET GFHHDEVLIM DSSVDSATVT 360 AHEINCLESV LEEKSVTRTC KSQYEPRTCK SVVQEHPRRV KLQGKSLGKA VSRDKARESG 420 VRGPVVELAR NKKSIVQSNK DPKMDRDKNT RSDLNSRSKG SAGSSRKNSF NSVEMSQLSC 480 KTNPPLVYVG NVLLGVILFI FVVWEVLFLH

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MNIVLDVGFR FLPPDEEIIS FFLSKKMIGD NDRTRHIREV DLLQREPWEL PALSIVQSRY  60
QEWLFFYKLN KISDRKTERT TQAGYWKSTG QDREIRDGGR LIGTKKTLVF FKGRTPRGVK  120
TDWVMHEYRA TADFVPPNAE KSYVVGFLRN KAAERTENLT SINGQPSSHL AASSSQSNSV  180
GVAHMEVAPQ PQSNSIDYEI ALQTQFEDEG IFDYDLYDQS RMEEEGITLE DLPSNDQSWI  240
DQPQSNSMDY DEQTEWQFQF DTIEQELYFM TSTFPDQDDR SYEETGYPLR PNYGAPDFAG  300
GSSNTDLEQA NAWRDQFVQH MSDGTGCGHS EGFYQKRMET GFHHDEVLIM DSSVDSATVT  360
AHEINCLESV LEEKSVTRTC KSQYEPRTCK SVVQEHPRRV KLQGKSLGKA VSRDKARESG  420
VRGPVVELAR NKKSIVQSNK DPKMDRDKNT RSDLNSRSKG SAGSSRKNSF NSVEMSQLSC  480
KTNPPLVYVG NVLLGVILFI FVVWEVLFLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	4e-39	NAC family protein