PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021279364.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 492aa MW: 55585 Da PI: 7.6639

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021279364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.4	8.3e-51	72	200	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_021279364.1 72 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIREVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKII 165 69**************************.9***********964444222455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +gl+ktLvfykgrap+g+k+dW+mheyrl XP_021279364.1 166 YS-GFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 200 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MTALPFTHTL LLSRPRYCSS FFSFSYSLSP FADQFSFCVS VSQQGKKPPY SLILRQLMSE 60 DMNLSINGQS QVPPGFRFHP TEEELLHYYL RKKVAYEKID LDVIREVDLN KLEPWDIQEK 120 CKIGSTPQND WYFFSHKDKK YPTGTRTNRA TAAGFWKATG RDKIIYSGFR RIGLRKTLVF 180 YKGRAPHGQK SDWIMHEYRL DDNTTQDSNA SNSIGDSVPE DGWVVCRVFR KKNYQKTLES 240 PKSSSSTSLD SKTQMLCSGN DGVLDQILLY MGRTCKMEND SLSNINIPNA NNSNNNLRML 300 VANNTGIGDG LHERFMHLPR LESPTLPSLP MGSSPFDQER SFKSCYQSID DMLTETEPSS 360 INQGGGACDT GSVQNNNESK NGVNDWVTLE RLVASQLNGH VETSKQLSCF SDPNAVFSLC 420 HDDDIQLSHI NLHRSNQNSQ VYSNENDLWS LTKSSSPSSS DXPYAICRYN RSILPTCQVH 480 TKKPAAYCSS LN

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MTALPFTHTL LLSRPRYCSS FFSFSYSLSP FADQFSFCVS VSQQGKKPPY SLILRQLMSE  60
DMNLSINGQS QVPPGFRFHP TEEELLHYYL RKKVAYEKID LDVIREVDLN KLEPWDIQEK  120
CKIGSTPQND WYFFSHKDKK YPTGTRTNRA TAAGFWKATG RDKIIYSGFR RIGLRKTLVF  180
YKGRAPHGQK SDWIMHEYRL DDNTTQDSNA SNSIGDSVPE DGWVVCRVFR KKNYQKTLES  240
PKSSSSTSLD SKTQMLCSGN DGVLDQILLY MGRTCKMEND SLSNINIPNA NNSNNNLRML  300
VANNTGIGDG LHERFMHLPR LESPTLPSLP MGSSPFDQER SFKSCYQSID DMLTETEPSS  360
INQGGGACDT GSVQNNNESK NGVNDWVTLE RLVASQLNGH VETSKQLSCF SDPNAVFSLC  420
HDDDIQLSHI NLHRSNQNSQ VYSNENDLWS LTKSSSPSSS DXPYAICRYN RSILPTCQVH  480
TKKPAAYCSS LN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-100	NAC family protein