PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021279224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26791.2 Da PI: 6.9286 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.8 | 9.8e-17 | 68 | 117 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr++ + +Wv+e+r+p +k++r++lg++ t+e+Aa+a++ a+++++g XP_021279224.1 68 IFRGVRRRN-KDKWVCELREP---NKKTRIWLGTYPTPEMAARAHDVAALAFRG 117 59****888.7*********8...347************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 241 aa Download sequence |
MDISCQFSDL FSCKSYSMPA DRLEPSSSSE AGTVRRAVHS DEEVLLLATS RPKKRAGRRI 60 FKETRHPIFR GVRRRNKDKW VCELREPNKK TRIWLGTYPT PEMAARAHDV AALAFRGKAA 120 CLNFADSAWR LPVPASNDAV DIRRAAAEAA EAFRPQELDV LSSSDAKQES VKASDGEVSS 180 SAGNLGNSKI VSEKVHFLDE EAMFDMPKLL VSMAEGLLLS PPRNWDDSDS DIDVSLWSYS 240 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25490.1 | 3e-66 | ERF family protein |