PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279092.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bZIP
Protein Properties Length: 319aa    MW: 36121.1 Da    PI: 8.619
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279092.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.2e-111556445
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_021279092.1 15 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQDL 56
                    6889*************************9877777766666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MLQRRGSTSE KQLDAKTLRR LAQNREAARK SRLRKKAYVQ QLETSRIKLT QLEQDLQRAR  60
SQGLFLGGCS ATVGNISSGA AIFDMEYSRW LEDDQRHMSE LRTGLHAHLS DSDLRVIVDG  120
YISHYDDIFR LKGVAAKTDV FHLITGMWTT PAERCFLWMA GFRPSELIKM LISQLDPLTE  180
QQVMGIYSLQ HSSQQAEEAL TQGLEQLQQS LIDTVAGGPG IDAMQQMAVA LGKLANLEGF  240
VRQADNLRQQ TLHQLPRILT VRQAARCFLV IGEYYGRLRA LSSLWASRPR ESLMSDDHSC  300
QTTTDLHMVQ PSQNHFSNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.20.0bZIP family protein